BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F09SP1|AL430422
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 1727 0.0
>3x_Contig1247
Length = 7218
Score = 1727 bits (871), Expect = 0.0
Identities = 878/879 (99%), Gaps = 1/879 (0%)
Strand = Plus / Plus
Query: 1 gatcctaccagaaggaattacagtatctttaaaacaacttttcacctcagttattaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4827 gatcctaccagaaggaattacagtatctttaaaacaacttttcacctcagttattaagag 4886
Query: 61 aacatgccagaagaacataagaaattgttagatagttctggcactgcagctgacgcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4887 aacatgccagaagaacataagaaattgttagatagttctggcactgcagctgacgcagat 4946
Query: 121 gatgctaccgccactgccatcttgagaagaaagaagaagcaaaacatgttactggtcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4947 gatgctaccgccactgccatcttgagaagaaagaagaagcaaaacatgttactggtcgat 5006
Query: 181 gatgcagttaacgatgacaattctatcattgctatcaattctaacactatggatctttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5007 gatgcagttaacgatgacaattctatcattgctatcaattctaacactatggatctttta 5066
Query: 241 caattgttccgtggtgacaccgttttagtcaagggtaagaagagaaaggacaccgttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5067 caattgttccgtggtgacaccgttttagtcaagggtaagaagagaaaggacaccgttttg 5126
Query: 301 attgttatgattgatgacgaactggaagatggtgtctgtagagtaaaccgtgttattcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5127 attgttatgattgatgacgaactggaagatggtgtctgtagagtaaaccgtgttattcgt 5186
Query: 361 aacaacttgagaataagactcggtgatttggtcactatccatccatgtaccgatatcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5187 aacaacttgagaataagactcggtgatttggtcactatccatccatgtaccgatatcaag 5246
Query: 421 tatgcttccagaatctcagtgttgccaatcgctgacaccatcgaggggttgactggtaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5247 tatgcttccagaatctcagtgttgccaatcgctgacaccatcgaggggttgactggtaat 5306
Query: 481 ctatttgatgtgtacttgaagccatactttgtcgaagcttatagaccggttagaaaaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5307 ctatttgatgtgtacttgaagccatactttgtcgaagcttatagaccggttagaaaaggt 5366
Query: 541 gaccactttatcgttagaggtggtatgagacaagtagagttcaaggtcgtag-cgttgag 599
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5367 gaccactttatcgttagaggtggtatgagacaagtagagttcaaggtcgtagacgttgag 5426
Query: 600 cctgaagagtacggtgttgttgcccaagatactgtcattcatagtgaaggtgagccaatt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5427 cctgaagagtacggtgttgttgcccaagatactgtcattcatagtgaaggtgagccaatt 5486
Query: 660 aacagagaagatgaagaaaataacatcaatgaagtcggttatgatgatattggtggttgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5487 aacagagaagatgaagaaaataacatcaatgaagtcggttatgatgatattggtggttgt 5546
Query: 720 cgtaagcaaatggctcaaattagagaattggtcgaattgccattgagacacccacaacta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5547 cgtaagcaaatggctcaaattagagaattggtcgaattgccattgagacacccacaacta 5606
Query: 780 tttaaggccattggtatcaaacctccgaagggtattttgatgtacggtcctccaggtacc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5607 tttaaggccattggtatcaaacctccgaagggtattttgatgtacggtcctccaggtacc 5666
Query: 840 ggtaaaactctaatggccagagctgtggctaacgagaca 878
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5667 ggtaaaactctaatggccagagctgtggctaacgagaca 5705
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6728
Number of Sequences: 1807
Number of extensions: 6728
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)